Current

Professor Garry Nolan

Graduate School
1983-1989 Scientific Advisor:
Leonard Herzenberg
Department of Genetics, Stanford University

  • Immunogenetics & CD8 cloning / characterization with H. Nakauchi
  • Individual Cell Gene Expression, Epigenetics of Mammalian Gene Expression
  • Retroviral Integration systems with splice acceptors for in situ gene expression from active chromatin
  • Whole Animal Cell Sorting of DrosophilaThesis: Individual cell gene regulation studies and in situ detection of transcriptionally active chromatin using
    fluorescence activated cell sorting with a viable cell fluorogenic assay

Postdoctoral Work
1990-1993 Scientific Advisor:
David Baltimore
Whitehead Institute (MIT), Rockefeller University

  • Cloning and characterization of NFkB p65/RelA
  • Development of the 293T based retroviral packaging and delivery system with Warren Pear

Stanford Profile Page
Read full curriculum vitae

Salil Bhate, BA MMath

Position: Graduate student, coadvised by Professor Stanley Qi
Education: BA (Mathematics), University of Cambridge, 2013. MMath (Mathematics), University of Cambridge, 2014
Specialties: Machine learning for analysis of high-parameter tissue images, geometry, synthetic biology
Field: Machine learning, neural networks, cellular engineering, cancer immunotherapy

Projects: Deep neural networks to identify and characterize cellular niches. High-parameter in situ CRISPR screening

Xavier Rovira Clavé, Ph.D.

Position: Postdoctoral Fellow
Education: B.Sc. Biology, University of Barcelona, 2010; M.Sc. Immunology, University of Barcelona, 2011; Ph.D. Biomedicine, University of Barcelona, 2016.
Specialties: Immunology, mouse models of cancer, molecular biology
Field: Immunology, cancer biology

Projects: The interplay between nuclear architecture and gene expression in tumor initiation

Wendy J. Fantl, Ph.D.

Position : Assistant Professor . Division of Gynecologic Oncology .Department of Obstetrics and Gynecology
Education : A Biochemistry University of York UK. Ph.D Protein Biochemistry Rockefeller University. UCSF Post-doc and Adjunct Assistant Professor. Spent 16 years in the private sector (Biotech/Pharma/start-up arena)
Specialties : My passion is in the mechanistic understanding of intracellular signaling and its application to understanding disease mechanism and drug development with “eye on the prize” of a translational endpoint!! Current interests are to apply the recently described multi-parametric single-cell mass cytometry platform to identify disease-causing cell subpopulations and their signaling networks in ovarian cancer
Field : Algorithm Design, Bioinformatics, Flow/Mass Cytometry, Machine Learning, Personalized Cancer Medicine, Statistics, Cancer Stem Cells, Systems Immunology

Projects : Proteomic and molecular characterization of primary ovarian cancer at the single cell level

Yury Goltsev, Ph.D.

Position: Senior Research Scientist
Education: M.Sc. Biophysics, Moscow Institute of Physics and Technology; Ph.D., Ph.D. Molecular Immunology, Weizmann Institute of Science
Specialties: Single cell analysis of gene expression, RNA flow
Field: Immunology, Cancer Biology

Projects: Single cell analysis of trancriptional networks implicated in hematopoiesis

Sizun Jiang, Ph.D.

Position: Postdoctoral Fellow
Education: B.S. Molecular Biology, University of Wisconsin-Madison, 2011. Ph.D., Virology, Harvard University, 2017.
Specialties: Virology, Cancer Biology, Transcription, Epigenomics, Next-Generation Sequencing
Field: Chromatin Biology, Microbiology & Immunology

Projects: Methodology development for high-dimensional imaging. Dissecting Host-Pathogen Interactions with multiplexed imaging.

Darci Phillips, MD PhD

Position : Postdoctoral Fellow
Education :B.Eng, Biomedical Engineering, Vanderbilt University; PhD, Biochemistry, Oxford University; MD, Harvard Medical School; Residency, Dermatology, Stanford University
Specialties :Dermatology, Proteomics, Translational research
Field :Dermatology

Projects :Characterizing immune signatures of cutaneous T-cell lymphoma

David McIlwain, Ph.D.

Position: Sr. Research Scientist
Education: B.Sc. Anatomy and Cell Biology, McGill University; Ph.D. Medical Biophysics, University of Toronto; Postdoctoral. Department of Gastroenterology, Hepatology and Infectious Disease, Heinrich-Heine-Universität Düsseldorf; Microbiology and Immunology, Stanford University.
Specialties: Clinical studies, Non-human primates, Knockout mice, Viral infection, T-Cells, Innate immunity, Rhomboid proteases
Field: Infectious Disease, Mass Cytometry, CODEX Imaging, Systems Immunology.

Projects: Deep profiling time-dependent host responses to Ebola, influenza, zika and other infections

Angelica Trejo, B.S.

Position: LSRP Lab Manager
Education: Stanford University: B.S. in Biology
Specialties: Sectioning, in situ hybridization, histochemistry, and confocal microscopy.

Gustavo Vazquez, B.A.

Position: LSRP
Education: B.A. Biology, B.A. Anthropology, University of North Carolina at Chapel Hill
Specialties: Molecular biology techniques, Antibody conjugation and titration, Tissue culture
Field: Immunology

Projects: Multiplexed antibody staining and imaging

Yunhao Bai, B.S.

Position: Graduate student, Chemistry
Education: B.S. Chemistry, Tsinghua University, 2015
Specialties: polymer science, hydrogel, conjugation chemistry

Projects: Multiplexed ion beam imaging under expansion, novel polymer-antibody conjugates synthesis

Graham Larson Barlow

Position: Graduate Student
Education: BA (Molecular Biology), Pomona College
Field: Immunology and Systems Immunology
Specialties: Mouse models in Immunology, Molecular Biology, Computational Biology, and high dimensional imaging.

Projects: Cellular niches: discovery, function and malfunction

Bokai Zhu

Position: Ph.D. student
Education: BS Biology, Cornell University, 2017.
Field: Microbiology and Immunology
Specialties: Sequencing, imaging and beyond of complex bacterial communities

Nilanjan Mukherjee, M.S., M.Eng.

Position: Life Science Research Professional 2 (LSRP2)
Education: Integrated B.S., M.S. (Biological Sciences, Immunology), Indian Institute of Science Education and Research (Bhopal, MP, India), 2014, M.Eng. (Biomedical Engineering), Illinois Institute of Technology (Chicago, IL, USA), 2017.
Field: Molecular and Cellular Biology, Immunology, Host-viral interactions
Specialties: Mass cytometry, multiplexed antibody staining, tissue culture, cell-based assays, microscopy, molecular biology and biochemistry techniques

Projects: Deep profiling of single-cell immune phenotypes, understanding immunological, pathological & genetic signatures in a disease

Ramsey Nissan, M.S.

Position: Life Science Research Professional

Wilson F Kuswanto M.D., Ph. D

Position: Postdoctoral Fellow
Education: M.D., Ph. D Harvard Medical School; Internal medicine, Rheumatology Stanford University
Specialties: single cell RNA-seq analysis, multidimensional imaging
Field: Rheumatology, Immunology

Marc-A. Baertsch, M.D.

Position : Postdoc
Education : Medical School, University of Heidelberg, Germany 2014: M.D., National Center for Tumor Diseases/German Cancer Research Center, Heidelberg, Germany, 2016; Residency/Fellowship Internal Medicine/Haematology/Oncology, Heidelberg University Hospital, Germany
Specialties : Hematology/Oncology, Multiple Myeloma, Bone Marrow Microenvironment, Oncolytic Virotherapy
Field : Internal Medicine, Haematology/Oncology

Projects: Multiplex tissue imaging of bone marrow microenvironment and hematologic malignancies

Yuqi Tan, Ph.D.

Position: Postdoctoral Fellow
Education: B.Sc. the Chinese University of Hong Kong, 2014;  Ph.D. Johns Hopkins University, 2021.
Specialties: Single-cell Omics, Machine learning, Technology Development
Field: Single-cell Transcriptomics, Computational Stem Cell Engineering

Projects: Multi-omics integration, Spatial multi-omics, and 3D imaging

Theresa Chu, B.S

Position: Life Science Research Technician II

Aaron TAN Tze Kai B.Sc

Position: Ph.D. Student in Stem Cell Biology and Regenerative Medicine
Education: B.Sc (Hons), Development, Regeneration, and Stem Cell Biology, The University of Edinburgh, 2018.3.
Field: Hematopoietic Stem Cell Biology, Stem Cell Niche and Cellular Neighbourhoods4.
Specialties: Ex vivo Hematopoietic Stem Cell Cultures and Manipulation, Bone Marrow Conditioning, Hematopoietic Stem Cell Transplantation5.

Projects: Highly multiplexed profiling of ex vivo and in vivo hematopoietic stem cells at single-cell resolution (edited) 

Ivan Lee M.D. Ph.D.

Position: Instructor, Pediatrics – Immunology and Allergy
Clinical focus: Allergy and Immunology
Education: Fellowship: Stanford University Allergy and Immunology Fellowship (2020) CA•Doctorate of Philosophy (Ph.D.), University of Texas Southwestern Medical School, TX (2015)
Board Certification: Pediatrics, American Board of Pediatrics (2018)
Residency: Stanford University Pediatric Residency (2018) CA•Medical Education: University of Texas Southwestern Medical School Registrar (2015) TX

Neda H. B.  Ph.D.

Position: Postdoctoral Fellow

 

Shama Choudhry

Position: Administrative Assistant/ Office Manager

shamac@stanford.edu

Polly Kavanaugh, CPPS

Position: Lab Services Manager

Antonio Delgado González, Ph.D.

Position: Postdoctoral Research Fellow

Education: B.Sc. Pharmacy, University of Granada, 2013; M.Sc. Molecular Biology, University of Granada, 2014; Ph.D. Biomedicine, University of Granada, 2019.
Specialties: Chemical Biology, Nanoparticles, Dynamic Chemistry, Molecular Biology, Biomaterials
Field: Chemical Biology, Nanotechnology, Personalized Medicine, Molecular Diagnosis

Projects: Multi-parametric single-cell technologies (CyTOF and CODEX) applied to ovarian and kidney cancer.